URANIE::Calibration::TRejectionABC Class Reference

#include <TRejectionABC.h>

Inheritance diagram for URANIE::Calibration::TRejectionABC:

Collaboration diagram for URANIE::Calibration::TRejectionABC:

Public Member Functions
Constructor and Destructor
	TRejectionABC (URANIE::DataServer::TDataServer *tds, URANIE::Relauncher::TRun *run, int ns=1, Option_t *option="")
	Default ABC constructor with the runner argument: it contains the assessor to be used.
	TRejectionABC (URANIE::DataServer::TDataServer *tds, void(*fcn)(Double_t *, Double_t *), const char *varexpinput, const char *varexpoutput, int ns=100, Option_t *option="")
	Default ABC constructor with the function argument: it contains the assessor to be used
	TRejectionABC (URANIE::DataServer::TDataServer *tds, const char *fcn, const char *varexpinput, const char *varexpoutput, int ns=100, Option_t *option="")
	Default ABC constructor with the function argument: it contains the assessor to be used.
	TRejectionABC (URANIE::DataServer::TDataServer *tds, URANIE::Launcher::TCode *fcode, int ns=1, Option_t *option="")
	Default ABC constructor with the code argument: it contains the assessor to be used.
virtual	~TRejectionABC ()
	Default destructor.
Rejection ABC function
void	computeParameters (Option_t *option="")
	Generate the sample.
Public Member Functions inherited from URANIE::Calibration::TABC
	TABC (URANIE::DataServer::TDataServer *tds, URANIE::Relauncher::TRun *run, int ns=100, Option_t *option="")
	Default ABC constructor with the runner argument: it contains the assessor to be used.
	TABC (URANIE::DataServer::TDataServer *tds, void(*fcn)(Double_t *, Double_t *), const char *varexpinput, const char *varexpoutput, int ns=100, Option_t *option="")
	Default ABC constructor with the function argument: it contains the assessor to be used
	TABC (URANIE::DataServer::TDataServer *tds, const char *fcn, const char *varexpinput, const char *varexpoutput, int ns=100, Option_t *option="")
	Default ABC constructor with the function argument: it contains the assessor to be used.
	TABC (URANIE::DataServer::TDataServer *tds, URANIE::Launcher::TCode *fcode, int ns=1, Option_t *option="")
	Default ABC constructor with the code argument: it contains the assessor to be used.
virtual	~TABC ()
	Default destructor.
void	initABC ()
void	setUpABC ()
void	computeABC (int nEval)
void	computeABCscore (Double_t newEpsilon)
void	posteriorToPar ()
void	checktdsParContent ()
void	setGaussianNoise (const char *stdname)
void	setPercentile (Double_t eps)
	Set the percentile.
URANIE::DataServer::TDataServer *	getTdsPosterior ()
	Get the posterior tds.
double	getThreshold ()
	Get the posterior tds
int	getNEval ()
Public Member Functions inherited from URANIE::Calibration::TCalibration
	TCalibration (URANIE::DataServer::TDataServer *tds, URANIE::Relauncher::TRun *run, int ns=1, Option_t *option="")
	Default constructor with the runner argument: it contains the assessor to be used.
	TCalibration (URANIE::DataServer::TDataServer *tds, void(*fcn)(Double_t *, Double_t *), const char *varexpinput, const char *varexpoutput, int ns=1, Option_t *option="")
	Default Calibration constructor with the function argument: it contains the assessor to be used.
	TCalibration (URANIE::DataServer::TDataServer *tds, const char *fcn, const char *varexpinput, const char *varexpoutput, int ns=1, Option_t *option="")
	Default Calibration constructor with the function argument: it contains the assessor to be used.
	TCalibration (URANIE::DataServer::TDataServer *tds, URANIE::Launcher::TCode *fcode, int ns=1, const char *option="")
	Default Calibration constructor with the code argument: it contains the assessor to be used.
virtual	~TCalibration ()
	Default destructor.
virtual void	setDistanceAndReference (const char *funcName, URANIE::DataServer::TDataServer *tdsRef, const char *input, const char *reference, const char *weight="")
	Set the distance function and some needed informations.
virtual void	setDistanceAndReference (URANIE::Calibration::TDistanceFunction *distFunc, URANIE::DataServer::TDataServer *tdsRef, const char *input, const char *reference, const char *weight="")
	Set the distance function and some needed informations.
void	estimateParameters (Option_t *option="")
void	estimateCustomResidues (string resName, int n_theta, double *theta)
void	checkReference (URANIE::DataServer::TDataServer *tdsRef, const char *input, const char *output, const char *weight)
	Check the consistency of the formation provided.
virtual void	drawParameters (TString sTitre, const char *variable="*", const char *select="1>0", Option_t *option="")
void	drawResidues (TString sTitre, const char *variable="*", const char *select="1>0", Option_t *option="")
void	setLog ()
void	unsetLog ()
void	changeLog ()
Bool_t	getLog ()
virtual void	printLog (Option_t *option="")
Int_t	getID ()
void	setSeed (UInt_t nval)
	Set the seed of the random generator if one is used.
UInt_t	getSeed ()
	Get the seed of the random generator if one is used.
const char *	getMethodName ()
	Get the method name.
void	setObservationCovarianceMatrix (TMatrixD &mat)
	Set the observatiton covariance matrix.
URANIE::Calibration::TDistanceFunction *	getDistanceFunction ()
	Return the distance function.
Int_t	getNPar ()
	Get the number of parameters to be calibrated.
URANIE::DataServer::TDataServer *	getEvaluationTDS ()
	Get the tds in which evaluation will be performed.

Additional Inherited Members
Public Types inherited from URANIE::Calibration::TCalibration
enum	ELauncher { kCode , kFunction , kRun , kUnknown }
Public Attributes inherited from URANIE::Calibration::TABC
vector< double >	_values
URANIE::DataServer::TDataServer *	_tdsPosterior
	TDS containing posterior members for calibration.
Public Attributes inherited from URANIE::Calibration::TCalibration
URANIE::DataServer::TDataServer *	_tdsPar
	TDS containing parameters properties (parameters that should be calibrated)
URANIE::DataServer::TDataServer *	_tdsObs
	TDS containing observations used for calibration.
URANIE::DataServer::TDataServer *	_tdsEval
	TDS containing a priori / a posteriori evaluations.
ELauncher	_nLauncher
	The type of launcher.
TString	_sFunctionName
	The Name of the evaluatuor.
TString	_sEI
	The Name of input.
TString	_sEO
	The Name of output.
URANIE::Launcher::TCode *	_code
	The tcode.
URANIE::Relauncher::TRun *	_run
	Pointer to the runner to be used.
void(*	_pFunction )(double *, double *)
	Function pointer.
vector< URANIE::DataServer::TStochasticAttribute * >	_vatt
	internal vector of stochastic attribute for some methods
Protected Member Functions inherited from URANIE::Calibration::TCalibration
void	checkCanvasCreation (bool newcan)
	Create a canvas if needed.
void	initInputs ()
	Initialise some common inputs.
void	initResults (vector< string > *ParsedLines)
	Initialise some common inputs.
void	computeAPosterioriForDistribution ()
	Compute the a posteriori residual for many-solutions method.
virtual void	parseOption (Option_t *option="")
	Read the possible options.
void	setMethodName (const char *str)
	Set the Method name.
Protected Attributes inherited from URANIE::Calibration::TABC
double	_threshold
Int_t	_kPosterior
Int_t	_kEval
TRandom3 *	_rand
Bool_t	_boolEpsilon
Double_t	_Epsilon
Protected Attributes inherited from URANIE::Calibration::TCalibration
URANIE::Calibration::TDistanceFunction *	_dFunc
	Pointer to chosen distance function.
URANIE::DataServer::TDSNtupleD *	_evTuple
	Pointer to the eval ntuple.
TList *	_listOfParameters
	List of the parameters to be calibrated.
TCanvas *	_canvas
	Canvas object to deal with.
TObjArray *	_drawingGarbageCollector
	Garbage collector for prints.
int	_nSam
	The number of sample in a posteriori distributions.
int	_nObs
	The number of observations in the reference database.
int	_nIterMax
	The maximum number of iteration allowed (meaning total number of code estimation is _nIterMax * _nObs)
int	_nPar
	Dimension of the parameters.
int	_nVar
	Dimension of the output and references to be compared with.
int	_nSeed
	The seed of the random generator.
TString	_sMethodName
	The method name.
TString	_referenceName
	The reference name.
TString	_outputName
	The output name.
vector< string >	_vrefName
	The reference names.
vector< string >	_voutName
	The output names.
TString	_weightName
	The weight name.
TMatrixD	_mObsCovMat
	Observation Covariance matrix.
bool	_buseMatrix
	Use matrix instead of vectors in the Distance Function.
bool	_bsaveAll
	Whether all evaluations should be saved, not only a priori and a posteriori.
bool	_bdontKeepAgreement
	Remove the agreement attribute from the tdsPar object.
bool	_buseMode
	Use Mode instead of Mean.
Bool_t	_blog
	Boolean for edit the log.

Constructor & Destructor Documentation

TRejectionABC() [1/4]

URANIE::Calibration::TRejectionABC::TRejectionABC	(	URANIE::DataServer::TDataServer *	tds,
		URANIE::Relauncher::TRun *	run,
		int	ns = 1,
		Option_t *	option = ""
	)

Default ABC constructor with the runner argument: it contains the assessor to be used.

Parameters

tds	: the dataserver that contains no data but only one attribute per parameter to be calibrated
run	: the runner that contains the assessor to be used on the reference data
ns	: number of sample to be generated (depending on the method)

TRejectionABC() [2/4]

URANIE::Calibration::TRejectionABC::TRejectionABC	(	URANIE::DataServer::TDataServer *	tds,
		void(*)(Double_t *, Double_t *)	fcn,
		const char *	varexpinput,
		const char *	varexpoutput,
		int	ns = 100,
		Option_t *	option = ""
	)

Default ABC constructor with the function argument: it contains the assessor to be used

Parameters

tds	: the dataserver that contains no data but only one attribute per parameter to be calibrated
fcn	: the pointer to a function
ns	: number of sample to be generated (depending on the method)
varexpinput	: the input variable for the function in the correct order (both input and parameters)
varexpoutput	: the output of the function in the correct order

TRejectionABC() [3/4]

URANIE::Calibration::TRejectionABC::TRejectionABC	(	URANIE::DataServer::TDataServer *	tds,
		const char *	fcn,
		const char *	varexpinput,
		const char *	varexpoutput,
		int	ns = 100,
		Option_t *	option = ""
	)

Default ABC constructor with the function argument: it contains the assessor to be used.

Parameters

tds	: the dataserver that contains no data but only one attribute per parameter to be calibrated
fcn	: the name of the function
ns	: number of sample to be generated (depending on the method)
varexpinput	: the input variable for the function in the correct order (both input and parameters)
varexpoutput	: the output of the function in the correct order

TRejectionABC() [4/4]

URANIE::Calibration::TRejectionABC::TRejectionABC	(	URANIE::DataServer::TDataServer *	tds,
		URANIE::Launcher::TCode *	fcode,
		int	ns = 1,
		Option_t *	option = ""
	)

Default ABC constructor with the code argument: it contains the assessor to be used.

Parameters

tds	: the dataserver that contains no data but only one attribute per parameter to be calibrated
code	: the code object that will be runned
ns	: number of sample to be generated (depending on the method)

~TRejectionABC()

URANIE::Calibration::TRejectionABC::~TRejectionABC ( )

virtual

Default destructor.

References URANIE::Calibration::TCalibration::_blog.

Member Function Documentation

computeParameters()

void URANIE::Calibration::TRejectionABC::computeParameters ( Option_t *  option = "" )

virtual

Generate the sample.

Parameters

option

possble options are "clean": remove internal branche from the tdsPar object at the end "gd": another implementation of this algorithm

Implements URANIE::Calibration::TCalibration.

References URANIE::Calibration::TCalibration::_blog, URANIE::Calibration::TABC::_boolEpsilon, URANIE::Calibration::TABC::_Epsilon, URANIE::Calibration::TCalibration::_nIterMax, URANIE::Calibration::TCalibration::_nSam, URANIE::Calibration::TCalibration::_tdsPar, URANIE::Calibration::TABC::_threshold, URANIE::Calibration::TABC::computeABC(), URANIE::Calibration::TABC::computeABCscore(), URANIE::Calibration::TABC::posteriorToPar(), and URANIE::Calibration::TABC::setUpABC().